CDS

Accession Number TCMCG075C18613
gbkey CDS
Protein Id XP_007023092.1
Location complement(join(1445552..1445648,1446656..1446738,1446842..1446911,1447010..1447101,1448639..1448753,1448874..1449003,1450185..1450260,1450356..1450535,1451090..1451233))
Gene LOC18595193
GeneID 18595193
Organism Theobroma cacao

Protein

Length 328aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_007023030.2
Definition PREDICTED: U1 small nuclear ribonucleoprotein A [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA-binding protein with multiple splicing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009887        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030510        [VIEW IN EMBL-EBI]
GO:0030514        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045596        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048546        [VIEW IN EMBL-EBI]
GO:0048557        [VIEW IN EMBL-EBI]
GO:0048562        [VIEW IN EMBL-EBI]
GO:0048565        [VIEW IN EMBL-EBI]
GO:0048566        [VIEW IN EMBL-EBI]
GO:0048568        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048660        [VIEW IN EMBL-EBI]
GO:0048661        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051147        [VIEW IN EMBL-EBI]
GO:0051148        [VIEW IN EMBL-EBI]
GO:0051150        [VIEW IN EMBL-EBI]
GO:0051151        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0055123        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090092        [VIEW IN EMBL-EBI]
GO:0090101        [VIEW IN EMBL-EBI]
GO:0090287        [VIEW IN EMBL-EBI]
GO:0090288        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGGTGCTGGAATCCACCCATATCACCAGCAATGGCCGCCGGCACCAGCACCTCCGCCCCCACCAGCCGCAGCAGCAGCCGCTCCTCCACCACCTCCTTCTGTCCACCATCCTCCTCCACCTGCTTCCTCTCATGACGAGGTTCGGACTATCTTCATTACGGGTCTTCCTGAAGATGTTAAAGAGAGAGAGCTACAGAATTTGCTGAGATGGCTTCCAGGTTATGAGGCTTCGCAAGTGAACTACAAGGGAGAAAAGCCCATGGGTTTTGCTCTCTTCTCAAGTGCACAACTTGCAGTTGCTGCAAAAGATTCCCTTCAGGACATGCTTTTTGATGCTGAGTCAAAGTCGGTATTGCACATAGAGATGGCAAAGAAGAATCTATTTGTTAAAAGAGGTATAGTAGCAGATTCTAATGCATATGATCAAAGCAAACGTTTGCGAACTGGTGGTGATTATTCACACAGTGCTTATACAGCTCCATCTCCATTTCACCCTCCTCCTGCTCCTGTTTGGGGACCACAAGGGTATATGGCTCCAACTCCTCCTCCATATGATCCGTATGGAGGTTATCCTGTTCCTCCAGTACCAATGCCAACCCCTGCTCCTGTACCGGCTCCAAGCAGTTACGTGCCTGTTCAGAATACCAAAGATAACCCTCCTTGCAATACCTTATTTATTGGCAATCTTGGAGAGAATATTAATGAGGAAGAACTAAGGGGCCTATTCAGTGTTCAACCTGGTTTTAAGCAAATGAAGATCTTGAGACAAGAAAGGCATACTGTCTGCTTTATAGAGTTTGAAGATGTCAATACTGCAACCAATGTGCACCACAATTTACAGGGTGCTGTGATCCCTAGTTCTGGTTCTGTTGGCATGCGAATACAATATTCTAAGAATCCTTTTGGTAAAAGGAAGGACTCTGGTCATCCCATTGCTTCCCCTGGTGCAAATGGTGCTCCACCATCAATGACTTACCAGTAG
Protein:  
MAGAGIHPYHQQWPPAPAPPPPPAAAAAAPPPPPSVHHPPPPASSHDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSSAQLAVAAKDSLQDMLFDAESKSVLHIEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHSAYTAPSPFHPPPAPVWGPQGYMAPTPPPYDPYGGYPVPPVPMPTPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHNLQGAVIPSSGSVGMRIQYSKNPFGKRKDSGHPIASPGANGAPPSMTYQ